Basic Information
Locus ID:
evm.TU.LG06.734
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
L-type lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 7000199 | 7010417 | + | evm.TU.LG06.734 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.65 | 112,695.54 Da | 47.01 | 73.53 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 20 | 256 | 2.23598E-72 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 26 | 255 | 3.8E-53 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 20 | 265 | 1.59E-54 | IPR013320 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 393 | 458 | 6.79E-9 | IPR011011 |
| Gene3D | G3DSA:2.30.30.1150 | - | 329 | 455 | 2.2E-7 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 19 | 264 | 3.6E-60 | - |
| SMART | SM00249 | PHD_3 | 404 | 452 | 3.4E-4 | IPR001965 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 405 | 451 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 490 | 561 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 582 | 605 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 606 | 630 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 492 | 512 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 575 | 630 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42120.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_006434427.1 | L-type lectin-domain containing receptor kinase S.6 [Citrus clementina] | 0 |
| Q9FHX3 | L-type lectin-domain containing receptor kinase S.6 OS=Arabidopsis thaliana OX=3702 GN=LECRKS6 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2H5NI31 | Protein kinase domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_047390 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology