Basic Information
Locus ID:
evm.TU.LG06.628
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 5828558 | 5832422 | - | evm.TU.LG06.628 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.28 | 63,055.67 Da | 29.87 | 73.32 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 21 | 151 | 2.73369E-51 | IPR033734 |
| CDD | cd09612 | Jacalin | 252 | 379 | 4.79687E-39 | IPR033734 |
| CDD | cd09612 | Jacalin | 473 | 555 | 3.02231E-25 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 254 | 381 | 6.4E-28 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 21 | 152 | 5.0E-35 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 473 | 555 | 2.1E-17 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 471 | 554 | 1.3E-22 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 241 | 381 | 2.88E-40 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 10 | 152 | 1.7E-46 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 228 | 381 | 2.0E-50 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 2 | 150 | 5.4E-61 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 419 | 555 | 3.2E-27 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 252 | 383 | 1.8E-40 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 21 | 152 | 2.7E-45 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 445 | 556 | 4.1E-9 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 10 | 152 | 55.944866 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 241 | 383 | 51.564781 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 414 | 556 | 23.839867 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.3 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_031268962.1 | jacalin-related lectin 3-like isoform X1 [Pistacia vera] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7H551 | Jacalin-related lectin 3-like OS=Acer yangbiense OX=1000413 GN=EZV62_021332 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology