halophFGD

Basic Information

Locus ID: evm.TU.LG06.454

Species & Taxonomic ID: Portulaca oleracea & 46147

Genome Assembly: GWHCBIU00000000

Description: belongs to the protein kinase superfamily

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr6	5823798	5824442	-	evm.TU.LG06.454

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.67	16,885.30 Da	32.10	107.16	0.18

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	84	135	6.21E-10	IPR011009
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	81	138	1.7E-13	-

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G02630.1	Protein kinase superfamily protein.
RefSeq	XP_010690890.1	probable receptor-like serine/threonine-protein kinase At4g34500 isoform X2 [Beta vulgaris subsp. vulgaris]
Swiss-Prot	Q3EDL4	Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2
TrEMBL	A0A8J4V7E9	Protein kinase domain-containing protein OS=Castanea mollissima OX=60419 GN=CMV_026578 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Apiaceae	Apium graveolens	2	Ag9G00052, Ag9G00097
Asparagaceae	Asparagus officinalis	1	AsparagusV1_08.1670.V1.1
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate04g29270
Portulacaceae	Portulaca oleracea	1	evm.TU.LG06.454