Basic Information
Locus ID:
evm.TU.LG06.453
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Endochitinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 5808895 | 5810598 | + | evm.TU.LG06.453 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 33,484.28 Da | 31.68 | 60.35 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00325 | chitinase_GH19 | 75 | 304 | 2.04453E-117 | - |
| CDD | cd06921 | ChtBD1_GH19_hevein | 25 | 61 | 8.25766E-16 | - |
| Pfam | PF00182 | Chitinase class I | 74 | 304 | 2.0E-127 | IPR000726 |
| Pfam | PF00187 | Chitin recognition protein | 26 | 64 | 5.1E-13 | IPR001002 |
| SUPERFAMILY | SSF57016 | Plant lectins/antimicrobial peptides | 26 | 67 | 2.49E-12 | IPR036861 |
| SUPERFAMILY | SSF53955 | Lysozyme-like | 71 | 310 | 4.5E-107 | IPR023346 |
| Gene3D | G3DSA:1.10.530.10 | - | 79 | 310 | 5.8E-121 | - |
| Gene3D | G3DSA:3.30.60.10 | - | 24 | 66 | 4.6E-16 | IPR036861 |
| Gene3D | G3DSA:3.30.20.10 | Endochitinase, domain 2 | 157 | 213 | 5.8E-121 | - |
| SMART | SM00270 | ChitinBD_3 | 26 | 64 | 3.0E-17 | IPR001002 |
| PIRSF | PIRSF001060 | Endochitinase | 2 | 311 | 8.7E-129 | IPR016283 |
| ProSiteProfiles | PS50941 | Chitin-binding type-1 domain profile. | 24 | 66 | 10.955446 | IPR001002 |
| ProSitePatterns | PS00773 | Chitinases family 19 signature 1. | 92 | 114 | - | IPR000726 |
| ProSitePatterns | PS00774 | Chitinases family 19 signature 2. | 217 | 227 | - | IPR000726 |
| ProSitePatterns | PS00026 | Chitin recognition or binding domain signature. | 36 | 55 | - | IPR018371 |
| PRINTS | PR00451 | Chitin-binding domain signature | 49 | 56 | 2.4E-6 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 34 | 42 | 2.4E-6 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 42 | 49 | 2.4E-6 | IPR001002 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12500.1 | basic chitinase. encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. | 0 |
| RefSeq | XP_021860442.1 | basic endochitinase [Spinacia oleracea] | 0 |
| P93680 | Endochitinase OS=Persea americana OX=3435 GN=chi1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9QAR7 | Chitin-binding type-1 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_205770 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology