Basic Information
Locus ID:
evm.TU.LG06.266
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 2387392 | 2392136 | + | evm.TU.LG06.266 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.90 | 40,246.71 Da | 43.69 | 69.16 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 86 | 362 | 6.8E-90 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 249 | 352 | 2.26E-20 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 247 | 365 | 6.9E-44 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 251 | 353 | 26.156076 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 197 | 216 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 183 | 219 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G22670.1 | indoleacetic acid-induced protein 8. IAA8 (IAA8) gene is auxin inducible. | 0 |
| RefSeq | XP_044511432.1 | auxin-responsive protein IAA9-like [Mangifera indica] | 0 |
| Q38826 | Auxin-responsive protein IAA8 OS=Arabidopsis thaliana OX=3702 GN=IAA8 PE=1 SV=1 | 0 | |
| TrEMBL | V4SH18 | Auxin-responsive protein OS=Citrus clementina OX=85681 GN=CICLE_v10001479mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology