Basic Information
Locus ID:
evm.TU.LG06.216
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
D-arabinono-1,4-lactone oxidase family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 2314576 | 2341626 | - | evm.TU.LG06.216 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.03 | 167,518.66 Da | 44.37 | 76.68 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00612 | IQ calmodulin-binding motif | 118 | 135 | 9.0E-5 | IPR000048 |
| Pfam | PF00612 | IQ calmodulin-binding motif | 140 | 159 | 0.015 | IPR000048 |
| Pfam | PF04030 | D-arabinono-1,4-lactone oxidase | 1404 | 1482 | 8.9E-9 | IPR007173 |
| Pfam | PF01565 | FAD binding domain | 525 | 657 | 4.5E-19 | IPR006094 |
| Pfam | PF01565 | FAD binding domain | 1014 | 1146 | 7.2E-17 | IPR006094 |
| Pfam | PF13178 | Protein of unknown function (DUF4005) | 367 | 458 | 4.8E-19 | IPR025064 |
| SUPERFAMILY | SSF56176 | FAD-binding/transporter-associated domain-like | 1000 | 1186 | 3.92E-35 | IPR036318 |
| SUPERFAMILY | SSF56176 | FAD-binding/transporter-associated domain-like | 511 | 696 | 4.67E-36 | IPR036318 |
| Gene3D | G3DSA:3.30.465.10 | - | 579 | 696 | 1.7E-30 | IPR016169 |
| Gene3D | G3DSA:1.20.5.190 | - | 114 | 167 | 2.3E-9 | - |
| Gene3D | G3DSA:3.30.465.10 | - | 1069 | 1186 | 1.5E-31 | IPR016169 |
| SMART | SM00015 | iq_5 | 138 | 159 | 41.0 | IPR000048 |
| SMART | SM00015 | iq_5 | 115 | 137 | 2.8E-5 | IPR000048 |
| TIGRFAM | TIGR01677 | pln_FAD_oxido: plant-specific FAD-dependent oxidoreductase | 493 | 977 | 1.1E-223 | IPR010030 |
| TIGRFAM | TIGR01677 | pln_FAD_oxido: plant-specific FAD-dependent oxidoreductase | 979 | 1503 | 9.7E-229 | IPR010030 |
| ProSiteProfiles | PS51387 | PCMH-type FAD-binding domain profile. | 1003 | 1187 | 19.832291 | IPR016166 |
| ProSiteProfiles | PS50096 | IQ motif profile. | 116 | 144 | 9.6697 | IPR000048 |
| ProSiteProfiles | PS51387 | PCMH-type FAD-binding domain profile. | 518 | 698 | 20.05324 | IPR016166 |
| ProSiteProfiles | PS50096 | IQ motif profile. | 140 | 167 | 8.9194 | IPR000048 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 327 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 52 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 411 | 431 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 380 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 244 | 267 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 69 | - | - |
| Coils | Coil | Coil | 1264 | 1284 | - | - |
Gene Ontology
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46760.1 | D-arabinono-1,4-lactone oxidase family protein. | 0 |
| RefSeq | XP_021767208.1 | probable L-gulonolactone oxidase 6 [Chenopodium quinoa] | 0 |
| O81032 | Probable L-gulonolactone oxidase 6 OS=Arabidopsis thaliana OX=3702 GN=GULLO6 PE=3 SV=1 | 0 | |
| TrEMBL | A0A803KZU3 | L-gulonolactone oxidase OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology