Basic Information
Locus ID:
evm.TU.LG06.1924
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
ATPase family associated with various cellular activities (AAA)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 51644527 | 51650377 | - | evm.TU.LG06.1924 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.16 | 92,613.98 Da | 43.60 | 86.54 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 554 | 687 | 1.34855E-24 | - |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 556 | 686 | 1.3E-38 | IPR003959 |
| Pfam | PF17862 | AAA+ lid domain | 708 | 751 | 4.0E-11 | IPR041569 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 515 | 744 | 3.6E-58 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 688 | 758 | 3.5E-94 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 515 | 687 | 3.5E-94 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 48 | 353 | 1.0E-6 | IPR027417 |
| SMART | SM00382 | AAA_5 | 552 | 689 | 8.1E-21 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 659 | 678 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 448 | 479 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 752 | 776 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 184 | 220 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 448 | 489 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28000.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_010671575.1 | uncharacterized protein LOC104888335 [Beta vulgaris subsp. vulgaris] | 0 |
| Q6NW58 | Spastin OS=Danio rerio OX=7955 GN=spast PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9QMI3 | AAA domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_167600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology