Basic Information
Locus ID:
evm.TU.LG06.189
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 1552247 | 1555664 | + | evm.TU.LG06.189 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.52 | 106,665.91 Da | 31.70 | 103.63 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 239 | 261 | 0.48 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 65 | 1.8E-9 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 524 | 540 | 0.71 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 287 | 309 | 0.36 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 166 | 184 | 0.71 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 693 | 966 | 5.0E-44 | IPR001245 |
| SUPERFAMILY | SSF52047 | RNI-like | 72 | 419 | 7.85E-63 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 359 | 615 | 1.43E-49 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 682 | 966 | 1.2E-72 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 138 | 5.1E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 379 | 618 | 1.0E-60 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 139 | 223 | 6.3E-21 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 767 | 968 | 7.3E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 654 | 766 | 1.5E-22 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 224 | 378 | 7.5E-49 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 237 | 261 | 87.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 476 | 500 | 10.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 285 | 309 | 57.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 690 | 966 | 1.3E-29 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 333 | 357 | 56.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 690 | 968 | 37.643803 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 811 | 823 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_021692733.1 | receptor protein kinase CLAVATA1-like [Hevea brasiliensis] | 0 |
| Q9SYQ8 | Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana OX=3702 GN=CLV1 PE=1 SV=3 | 0 | |
| TrEMBL | A0A6P4A9R0 | receptor protein kinase CLAVATA1 OS=Ziziphus jujuba OX=326968 GN=LOC107420421 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology