Basic Information
Locus ID:
evm.TU.LG06.1800
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 46138040 | 46142930 | + | evm.TU.LG06.1800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.33 | 69,647.43 Da | 40.92 | 84.85 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03000 | NPH3 family | 213 | 477 | 1.6E-88 | IPR027356 |
| Pfam | PF00651 | BTB/POZ domain | 27 | 115 | 1.6E-7 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 17 | 116 | 2.04E-17 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 17 | 148 | 6.8E-13 | IPR011333 |
| SMART | SM00225 | BTB_4 | 29 | 129 | 8.6E-6 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 29 | 99 | 11.398828 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 213 | 501 | 90.18589 | IPR027356 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 581 | 631 | - | - |
| Coils | Coil | Coil | 537 | 564 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03250.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_021770684.1 | BTB/POZ domain-containing protein At5g03250-like [Chenopodium quinoa] | 0 |
| Q9LYW0 | BTB/POZ domain-containing protein At5g03250 OS=Arabidopsis thaliana OX=3702 GN=At5g03250 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LSD0 | BTB/POZ domain-containing protein At5g03250-like OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology