Basic Information
Locus ID:
evm.TU.LG06.1778
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 45842055 | 45848417 | + | evm.TU.LG06.1778 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 102,826.23 Da | 29.68 | 89.14 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 633 | 900 | 1.00848E-93 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 61 | 2.1E-4 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 628 | 895 | 5.8E-49 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 284 | 393 | 1.81E-11 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 608 | 897 | 1.48E-78 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 32 | 298 | 4.93E-48 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 181 | 281 | 9.6E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 180 | 8.5E-41 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 703 | 914 | 1.1E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 282 | 417 | 4.0E-17 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 600 | 702 | 9.8E-37 | - |
| SMART | SM00220 | serkin_6 | 627 | 901 | 6.0E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 627 | 901 | 38.873459 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 633 | 655 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 747 | 759 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 912 | 936 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021720987.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Chenopodium quinoa] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MMK1 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology