Basic Information
Locus ID:
evm.TU.LG06.1676
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
proteinaceous RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 44545860 | 44553997 | - | evm.TU.LG06.1676 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.80 | 62,011.64 Da | 43.11 | 78.22 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 20 | 230 | 3.0E-78 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 271 | 497 | 1.3E-55 | IPR031595 |
| Gene3D | G3DSA:3.40.50.11980 | - | 288 | 463 | 1.1E-215 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 29 | 500 | 1.1E-215 | IPR011990 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 516 | 530 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 516 | 546 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 532 | 546 | - | - |
| Coils | Coil | Coil | 11 | 31 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21900.1 | proteinaceous RNase P 3. | 0 |
| RefSeq | XP_021722085.1 | proteinaceous RNase P 2-like isoform X1 [Chenopodium quinoa] | 0 |
| F4JKB6 | Proteinaceous RNase P 3 OS=Arabidopsis thaliana OX=3702 GN=PRORP3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LD46 | ribonuclease P OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology