Basic Information
Locus ID:
evm.TU.LG06.1636
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
beta-N-acetylhexosaminidase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 43852843 | 43854693 | + | evm.TU.LG06.1636 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.65 | 37,276.90 Da | 45.39 | 65.57 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06921 | ChtBD1_GH19_hevein | 26 | 65 | 2.794E-16 | - |
| CDD | cd00325 | chitinase_GH19 | 94 | 326 | 3.11303E-105 | - |
| Pfam | PF00182 | Chitinase class I | 95 | 326 | 7.0E-113 | IPR000726 |
| Pfam | PF00187 | Chitin recognition protein | 27 | 65 | 1.5E-13 | IPR001002 |
| SUPERFAMILY | SSF57016 | Plant lectins/antimicrobial peptides | 27 | 75 | 4.97E-13 | IPR036861 |
| SUPERFAMILY | SSF53955 | Lysozyme-like | 90 | 333 | 2.45E-94 | IPR023346 |
| Gene3D | G3DSA:1.10.530.10 | - | 98 | 332 | 4.1E-108 | - |
| Gene3D | G3DSA:3.30.20.10 | Endochitinase, domain 2 | 176 | 233 | 4.1E-108 | - |
| Gene3D | G3DSA:3.30.60.10 | - | 25 | 67 | 2.3E-18 | IPR036861 |
| SMART | SM00270 | ChitinBD_3 | 27 | 65 | 3.9E-15 | IPR001002 |
| PIRSF | PIRSF001060 | Endochitinase | 1 | 333 | 1.6E-109 | IPR016283 |
| ProSiteProfiles | PS50941 | Chitin-binding type-1 domain profile. | 25 | 67 | 10.269255 | IPR001002 |
| ProSitePatterns | PS00774 | Chitinases family 19 signature 2. | 237 | 247 | - | IPR000726 |
| ProSitePatterns | PS00026 | Chitin recognition or binding domain signature. | 37 | 56 | - | IPR018371 |
| PRINTS | PR00451 | Chitin-binding domain signature | 35 | 43 | 6.2E-6 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 43 | 50 | 6.2E-6 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 50 | 57 | 6.2E-6 | IPR001002 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12500.1 | basic chitinase. encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. | 0 |
| RefSeq | XP_052156822.1 | chitinase 9 [Oryza glaberrima] | 0 |
| Q688M5 | Chitinase 9 OS=Oryza sativa subsp. japonica OX=39947 GN=Cht9 PE=2 SV=1 | 0 | |
| TrEMBL | E2J9M1 | Chitinase OS=Morus alba var. multicaulis OX=170012 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology