Basic Information
Locus ID:
evm.TU.LG06.1564
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
F-box Kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 42705471 | 42706628 | - | evm.TU.LG06.1564 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 42,229.58 Da | 50.38 | 74.75 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 162 | 203 | 2.2E-8 | IPR006652 |
| Pfam | PF00646 | F-box domain | 6 | 48 | 3.1E-4 | IPR001810 |
| Pfam | PF01344 | Kelch motif | 110 | 155 | 4.2E-6 | IPR006652 |
| SUPERFAMILY | SSF117281 | Kelch motif | 85 | 327 | 5.75E-38 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 4 | 55 | 8.9E-7 | IPR036047 |
| Gene3D | G3DSA:2.120.10.80 | - | 79 | 359 | 3.1E-35 | IPR015915 |
| SMART | SM00612 | kelc_smart | 170 | 217 | 8.3E-7 | IPR006652 |
| SMART | SM00612 | kelc_smart | 120 | 168 | 1.3E-6 | IPR006652 |
| SMART | SM00256 | fbox_2 | 9 | 49 | 0.0011 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59940.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_021774721.1 | F-box/kelch-repeat protein SKIP20-like [Chenopodium quinoa] | 0 |
| Q9M1Y1 | F-box/kelch-repeat protein SKIP20 OS=Arabidopsis thaliana OX=3702 GN=SKIP20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M5G1 | F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology