Basic Information
Locus ID:
evm.TU.LG06.1404
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Nascent polypeptide-associated complex subunit alpha-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 39372487 | 39374325 | - | evm.TU.LG06.1404 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.34 | 22,212.33 Da | 55.08 | 73.94 | -0.79 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14415 | UBA_NACA_NACP1 | 157 | 202 | 4.83074E-18 | - |
| Pfam | PF01849 | NAC domain | 65 | 120 | 6.1E-22 | IPR002715 |
| Pfam | PF19026 | HYPK UBA domain | 164 | 202 | 7.3E-13 | IPR044034 |
| Gene3D | G3DSA:1.10.8.10 | - | 164 | 201 | 1.3E-19 | - |
| Gene3D | G3DSA:2.20.70.30 | - | 71 | 124 | 5.8E-32 | IPR038187 |
| SMART | SM01407 | NAC_2 | 65 | 121 | 7.1E-26 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 62 | 127 | 17.645475 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 130 | 166 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 52 | 72 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12390.1 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 0 |
| RefSeq | XP_020690055.1 | nascent polypeptide-associated complex subunit alpha-like protein 1 [Dendrobium catenatum] | 0 |
| Q9LHG9 | Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1 | 0 | |
| TrEMBL | A0A804J5G5 | (wild Malaysian banana) hypothetical protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=GSMUA_269230.1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology