Basic Information
Locus ID:
evm.TU.LG06.1189
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
F-box kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 34198904 | 34202434 | - | evm.TU.LG06.1189 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.23 | 62,859.72 Da | 43.89 | 71.96 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 91 | 134 | 1.5E-7 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 149 | 184 | 5.6E-8 | IPR006652 |
| SUPERFAMILY | SSF117281 | Kelch motif | 59 | 318 | 1.06E-40 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 51 | 330 | 3.2E-36 | IPR015915 |
| SMART | SM00612 | kelc_smart | 151 | 198 | 4.1E-7 | IPR006652 |
| SMART | SM00612 | kelc_smart | 99 | 148 | 4.7E-6 | IPR006652 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 515 | 529 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 449 | 465 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 446 | 534 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 473 | 499 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80440.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_010691786.2 | F-box/kelch-repeat protein At1g80440 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9M8L2 | F-box/kelch-repeat protein At1g80440 OS=Arabidopsis thaliana OX=3702 GN=At1g80440 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9R5I7 | F-box domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_109840 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology