Basic Information
Locus ID:
evm.TU.LG06.1126
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Serine threonine-protein kinase-like protein CCR4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG06 | 12878301 | 12880586 | + | evm.TU.LG06.1126 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 83,521.18 Da | 44.77 | 86.70 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 462 | 741 | 8.20213E-98 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 459 | 739 | 6.4E-47 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 433 | 740 | 2.02E-79 | IPR011009 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 110 | 291 | 3.79E-17 | IPR009091 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 542 | 750 | 1.2E-55 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 68 | 304 | 4.0E-25 | IPR009091 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 427 | 541 | 1.0E-32 | - |
| SMART | SM00220 | serkin_6 | 456 | 744 | 5.1E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 456 | 752 | 39.523624 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 462 | 484 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 587 | 599 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | XP_044510359.1 | serine/threonine-protein kinase-like protein CCR4 [Mangifera indica] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2I4FPI0 | serine/threonine-protein kinase-like protein CCR4 OS=Juglans regia OX=51240 GN=LOC109000945 PE=4 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology