Basic Information
Locus ID:
evm.TU.LG06.1100
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Fasciclin-like arabinogalactan protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 31722163 | 31726087 | - | evm.TU.LG06.1100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.03 | 30,702.29 Da | 45.94 | 82.35 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02469 | Fasciclin domain | 85 | 220 | 5.4E-21 | IPR000782 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 79 | 220 | 9.42E-26 | IPR036378 |
| SUPERFAMILY | SSF81483 | Bacterial photosystem II reaction centre, L and M subunits | 1 | 43 | 5.75E-6 | IPR036854 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 50 | 220 | 4.4E-18 | IPR036378 |
| SMART | SM00554 | fasc_3 | 114 | 221 | 2.8E-21 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 73 | 218 | 18.002838 | IPR000782 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 233 | 261 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 223 | 262 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03870.1 | FASCICLIN-like arabinoogalactan 9. fasciclin-like arabinogalactan-protein 9 (Fla9) | 0 |
| RefSeq | XP_021756889.1 | fasciclin-like arabinogalactan protein 9 [Chenopodium quinoa] | 0 |
| Q9ZWA8 | Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=FLA9 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7C8ZYQ6 | FAS1 domain-containing protein OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology