Basic Information
Locus ID:
evm.TU.LG06.1098
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Glutelin type-A
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 31682533 | 31686472 | + | evm.TU.LG06.1098 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.07 | 38,068.02 Da | 27.97 | 99.94 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02243 | cupin_11S_legumin_C | 195 | 349 | 2.35324E-63 | - |
| CDD | cd02242 | cupin_11S_legumin_N | 14 | 159 | 1.03931E-59 | - |
| Pfam | PF00190 | Cupin | 11 | 152 | 3.8E-22 | IPR006045 |
| Pfam | PF00190 | Cupin | 191 | 330 | 3.2E-25 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 13 | 338 | 1.73E-51 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 3 | 179 | 9.1E-33 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 190 | 351 | 1.1E-45 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 4 | 153 | 1.0E-20 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 186 | 335 | 1.8E-25 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 312 | 329 | 1.2E-13 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 207 | 227 | 1.2E-13 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 254 | 270 | 1.2E-13 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 272 | 287 | 1.2E-13 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G07750.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_010112922.1 | 12S seed storage globulin 2 [Morus notabilis] | 0 |
| A0A222NNM9 | Cocosin 1 OS=Cocos nucifera OX=13894 GN=COS-1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C8ZZK3 | Cupin type-1 domain-containing protein OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology