Basic Information
Locus ID:
evm.TU.LG05.950
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Src homology 3 domains
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG05 | 18281928 | 18293966 | - | evm.TU.LG05.950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.19 | 50,240.07 Da | 50.08 | 90.82 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd11839 | SH3_Intersectin_4 | 382 | 433 | 3.88031E-24 | - |
| Pfam | PF14604 | Variant SH3 domain | 385 | 433 | 9.7E-11 | IPR001452 |
| SUPERFAMILY | SSF50044 | SH3-domain | 380 | 441 | 1.58E-16 | IPR036028 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 127 | 339 | 3.66E-22 | IPR027267 |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 121 | 340 | 5.5E-12 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 367 | 449 | 6.7E-16 | - |
| SMART | SM00326 | SH3_2 | 381 | 436 | 3.2E-14 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 378 | 437 | 20.666479 | IPR001452 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 39 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 39 | 60 | - | - |
| Coils | Coil | Coil | 274 | 294 | - | - |
| Coils | Coil | Coil | 79 | 106 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G31440.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_052298203.1 | SH3 domain-containing protein 3-like isoform X1 [Citrus sinensis] | 0 |
| Q9C865 | SH3 domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=SH3P1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7HDA6 | SH3 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_019841 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology