Basic Information
Locus ID:
evm.TU.LG05.649
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Oxidation resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 7545992 | 7550693 | - | evm.TU.LG05.649 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.46 | 41,584.79 Da | 44.07 | 75.92 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07534 | TLD | 214 | 351 | 9.6E-31 | IPR006571 |
| SMART | SM00584 | 109ultra | 188 | 352 | 4.3E-31 | IPR006571 |
| ProSiteProfiles | PS51886 | TLDc domain profile. | 189 | 352 | 24.518562 | IPR006571 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 100 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 106 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 60 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 144 | 170 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 44 | 58 | - | - |
| Coils | Coil | Coil | 39 | 59 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G39870.1 | TLD-domain containing nucleolar protein. | 0 |
| RefSeq | XP_021851510.1 | nuclear receptor coactivator 7 [Spinacia oleracea] | 0 |
| Q6BJM5 | Oxidation resistance protein 1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=OXR1 PE=3 SV=2 | 0 | |
| TrEMBL | A0A7C9CS70 | TLDc domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology