Basic Information
Locus ID:
evm.TU.LG05.459
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG05 | 5755718 | 5758843 | + | evm.TU.LG05.459 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.53 | 94,286.32 Da | 39.04 | 107.82 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 129 | 189 | 6.3E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 37 | 76 | 2.5E-12 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 571 | 592 | 0.2 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 202 | 260 | 1.7E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 400 | 460 | 4.9E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 378 | 631 | 7.14E-60 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 675 | 722 | 5.88E-5 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 37 | 333 | 4.93E-63 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 731 | 858 | 2.23E-14 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 338 | 639 | 1.2E-86 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 269 | 337 | 2.4E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 152 | 268 | 4.2E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 37 | 151 | 1.0E-33 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 708 | 864 | 1.0E-23 | - |
| SMART | SM00365 | LRR_sd22_2 | 375 | 401 | 220.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 592 | 623 | 330.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 568 | 591 | 22.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 152 | 175 | 20.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 520 | 539 | 420.0 | - |
| SMART | SM00369 | LRR_typ_2 | 200 | 224 | 68.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 103 | 127 | 44.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 247 | 271 | 74.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 568 | 591 | 77.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 471 | 495 | 30.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 592 | 617 | 12.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 176 | 202 | 670.0 | - |
| SMART | SM00369 | LRR_typ_2 | 447 | 470 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 399 | 423 | 45.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 176 | 199 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 296 | 320 | 200.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 570 | 593 | 7.519437 | IPR001611 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 571 | 584 | 3.3E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 592 | 605 | 3.3E-5 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47090.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_006446430.1 | putative receptor-like protein kinase At3g47110 [Citrus clementina] | 0 |
| C0LGP4 | Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana OX=3702 GN=At3g47570 PE=2 SV=1 | 0 | |
| TrEMBL | V4U6H7 | Protein kinase domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10014130mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG05.457, evm.TU.LG05.459 |