Basic Information
Locus ID:
evm.TU.LG05.457
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG05 | 5730580 | 5733713 | + | evm.TU.LG05.457 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.17 | 94,118.26 Da | 35.92 | 108.50 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 570 | 591 | 0.2 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 129 | 188 | 1.3E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 201 | 259 | 3.3E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 37 | 76 | 2.5E-12 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 676 | 723 | 3.06E-5 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 37 | 333 | 3.4E-64 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 729 | 855 | 9.21E-15 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 349 | 630 | 8.96E-63 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 707 | 864 | 1.5E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 95 | 5.0E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 96 | 338 | 3.0E-63 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 339 | 638 | 1.4E-84 | IPR032675 |
| SMART | SM00365 | LRR_sd22_2 | 567 | 590 | 22.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 591 | 622 | 380.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 175 | 201 | 640.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 374 | 400 | 42.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 151 | 174 | 46.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 519 | 548 | 700.0 | - |
| SMART | SM00369 | LRR_typ_2 | 175 | 198 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 398 | 422 | 39.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 567 | 590 | 77.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 494 | 519 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 246 | 270 | 56.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 591 | 616 | 41.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 446 | 469 | 36.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 103 | 126 | 260.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 199 | 223 | 68.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 127 | 151 | 29.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 295 | 319 | 300.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 569 | 592 | 7.519437 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 707 | 735 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 570 | 583 | 3.3E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 591 | 604 | 3.3E-5 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47090.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_006446430.1 | putative receptor-like protein kinase At3g47110 [Citrus clementina] | 0 |
| Q9SD62 | Putative receptor-like protein kinase At3g47110 OS=Arabidopsis thaliana OX=3702 GN=At3g47110 PE=3 SV=1 | 0 | |
| TrEMBL | V4U6H7 | Protein kinase domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10014130mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG05.457, evm.TU.LG05.459 |