Basic Information
Locus ID:
evm.TU.LG05.378
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG05 | 4369451 | 4371003 | + | evm.TU.LG05.378 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.58 | 52,553.51 Da | 57.23 | 90.69 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 17 | 53 | 1.3E-8 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 104 | 347 | 1.6E-10 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 14 | 63 | 2.49E-11 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 81 | 366 | 3.7E-8 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 3 | 54 | 3.9E-7 | - |
| SMART | SM00256 | fbox_2 | 21 | 62 | 4.9E-4 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 15 | 51 | 10.133335 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13570.2 | - | 0 |
| RefSeq | XP_044499805.1 | F-box/FBD/LRR-repeat protein At1g13570-like isoform X1 [Mangifera indica] | 0 |
| Q1PFK0 | F-box/LRR-repeat protein At1g55660 OS=Arabidopsis thaliana OX=3702 GN=At1g55660 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7HC78 | F-box domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_019348 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology