Basic Information
Locus ID:
evm.TU.LG05.375
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG05 | 4355719 | 4357247 | + | evm.TU.LG05.375 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 51,523.48 Da | 56.47 | 93.01 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 12 | 47 | 4.8E-8 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 110 | 337 | 8.24E-10 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 9 | 58 | 4.19E-12 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 90 | 356 | 3.0E-6 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 3 | 49 | 5.1E-8 | - |
| SMART | SM00256 | fbox_2 | 16 | 57 | 1.6E-4 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 10 | 46 | 10.265807 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G58900.3 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_044499805.1 | F-box/FBD/LRR-repeat protein At1g13570-like isoform X1 [Mangifera indica] | 0 |
| Q93ZX6 | F-box/LRR-repeat protein At3g58900 OS=Arabidopsis thaliana OX=3702 GN=At3g58900 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7HC78 | F-box domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_019348 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology