Basic Information
Locus ID:
evm.TU.LG05.357
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG05 | 4107784 | 4111089 | + | evm.TU.LG05.357 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.47 | 104,111.83 Da | 44.08 | 67.82 | -0.78 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 177 | 263 | 7.71307E-26 | - |
| Pfam | PF00855 | PWWP domain | 177 | 262 | 6.5E-19 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 175 | 278 | 1.02E-24 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 171 | 268 | 6.5E-23 | - |
| SMART | SM00293 | PWWP_4 | 177 | 238 | 1.8E-11 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 179 | 240 | 12.512361 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 602 | 617 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 438 | 562 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 526 | 550 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 872 | 896 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 709 | 786 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 138 | 160 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 138 | 170 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 511 | 525 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 602 | 632 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 438 | 452 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 685 | 789 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 493 | 510 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40340.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_044466387.1 | uncharacterized protein LOC123196426 [Mangifera indica] | 0 |
| Q9FNE4 | PWWP domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PDP3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7HC27 | PWWP domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_019929 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology