Basic Information
Locus ID:
evm.TU.LG05.332
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Lysosomal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 3493587 | 3502327 | - | evm.TU.LG05.332 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.75 | 113,568.56 Da | 36.66 | 78.89 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10810 | GH38N_AMII_LAM_like | 35 | 312 | 1.70542E-170 | - |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 598 | 807 | 7.9E-49 | IPR011682 |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 36 | 348 | 3.4E-91 | IPR000602 |
| Pfam | PF09261 | Alpha mannosidase middle domain | 354 | 445 | 8.1E-18 | IPR015341 |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 890 | 999 | 8.5E-12 | IPR041147 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 352 | 447 | 1.86E-25 | IPR028995 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 24 | 350 | 1.89E-104 | IPR011330 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 459 | 1002 | 1.57E-136 | IPR011013 |
| Gene3D | G3DSA:2.70.98.30 | - | 595 | 856 | 4.4E-89 | - |
| Gene3D | G3DSA:2.60.40.1180 | - | 462 | 573 | 7.0E-25 | IPR013780 |
| Gene3D | G3DSA:2.60.40.1360 | - | 877 | 1002 | 1.1E-33 | - |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 35 | 316 | 2.6E-117 | IPR027291 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 395 | 451 | 2.2E-20 | IPR037094 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 317 | 394 | 3.0E-29 | IPR037094 |
| SMART | SM00872 | Alpha_mann_mid_2 | 353 | 427 | 2.0E-16 | IPR015341 |
| Coils | Coil | Coil | 923 | 943 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66150.2 | - | 0 |
| RefSeq | XP_021727587.1 | alpha-mannosidase-like isoform X1 [Chenopodium quinoa] | 0 |
| Q9FKW9 | Probable alpha-mannosidase At5g66150 OS=Arabidopsis thaliana OX=3702 GN=At5g66150 PE=3 SV=1 | 0 | |
| TrEMBL | A0A0K9QHW5 | Alpha-mannosidase OS=Spinacia oleracea OX=3562 GN=SOVF_177470 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology