Basic Information
Locus ID:
evm.TU.LG05.2389
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 52566252 | 52572484 | - | evm.TU.LG05.2389 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.82 | 87,061.76 Da | 46.69 | 80.38 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 18 | 164 | 1.25003E-57 | - |
| Pfam | PF00069 | Protein kinase domain | 456 | 713 | 3.7E-40 | IPR000719 |
| Pfam | PF00582 | Universal stress protein family | 18 | 153 | 2.9E-10 | IPR006016 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 18 | 161 | 6.2E-11 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 437 | 714 | 9.85E-67 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 528 | 731 | 2.6E-47 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 15 | 161 | 1.4E-12 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 423 | 527 | 3.9E-25 | - |
| SMART | SM00220 | serkin_6 | 455 | 715 | 1.5E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 455 | 725 | 33.912426 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 573 | 585 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 744 | 783 | - | - |
| Coils | Coil | Coil | 332 | 426 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_010669606.1 | U-box domain-containing protein 35 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1U8Q228 | U-box domain-containing protein 35-like isoform X3 OS=Nelumbo nucifera OX=4432 GN=LOC104593863 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology