Basic Information
Locus ID:
evm.TU.LG05.2332
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
phosphatase 2A 55 kDa regulatory subunit B
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 50559403 | 50572945 | + | evm.TU.LG05.2332 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 55,537.70 Da | 49.16 | 70.66 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 216 | 252 | 0.13 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 39 | 493 | 1.27E-35 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 76 | 498 | 1.3E-28 | IPR015943 |
| SMART | SM00320 | WD40_4 | 263 | 303 | 10.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 213 | 252 | 1.2 | IPR001680 |
| SMART | SM00320 | WD40_4 | 364 | 418 | 230.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 31 | 66 | 4.5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 105 | 145 | 17.0 | IPR001680 |
| PIRSF | PIRSF037309 | PPA2_B55 | 12 | 500 | 5.6E-197 | IPR000009 |
| ProSitePatterns | PS01024 | Protein phosphatase 2A regulatory subunit PR55 signature 1. | 105 | 119 | - | IPR018067 |
| ProSitePatterns | PS01025 | Protein phosphatase 2A regulatory subunit PR55 signature 2. | 222 | 236 | - | IPR018067 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 337 | 364 | 4.0E-156 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 92 | 120 | 4.0E-156 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 252 | 279 | 4.0E-156 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 280 | 308 | 4.0E-156 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 365 | 390 | 4.0E-156 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 121 | 149 | 4.0E-156 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 391 | 417 | 4.0E-156 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 309 | 336 | 4.0E-156 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 224 | 251 | 4.0E-156 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 45 | 65 | 4.0E-156 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 469 | 498 | 4.0E-156 | IPR000009 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 432 | 464 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 432 | 452 | - | - |
Gene Ontology
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04111 (Cell cycle - yeast)
map04111 (Cell cycle - yeast)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04391 (Hippo signaling pathway - fly)
map04391 (Hippo signaling pathway - fly)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G17720.2 | Protein phosphatase 2A, regulatory subunit PR55. type 2A protein serine/threonine phosphatase 55 kDa B | 0 |
| RefSeq | XP_010669250.1 | serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q39247 | Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Arabidopsis thaliana OX=3702 GN=PP2AB2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0J8CW97 | Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_2g033360 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology