Basic Information
Locus ID:
evm.TU.LG05.2308
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 49643894 | 49650031 | - | evm.TU.LG05.2308 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.51 | 82,153.13 Da | 44.26 | 83.99 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 434 | 694 | 3.84256E-87 | - |
| CDD | cd01989 | STK_N | 14 | 154 | 1.27662E-47 | - |
| Pfam | PF00069 | Protein kinase domain | 431 | 684 | 1.8E-42 | IPR000719 |
| Pfam | PF00582 | Universal stress protein family | 16 | 129 | 1.2E-8 | IPR006016 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 412 | 687 | 1.09E-68 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 16 | 130 | 1.42E-7 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 406 | 500 | 3.9E-24 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 15 | 152 | 2.2E-9 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 501 | 698 | 8.5E-50 | - |
| SMART | SM00220 | serkin_6 | 428 | 691 | 7.9E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 428 | 691 | 35.325825 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 546 | 558 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 717 | 740 | - | - |
| Coils | Coil | Coil | 354 | 397 | - | - |
| Coils | Coil | Coil | 294 | 314 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12000.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_048494692.1 | U-box domain-containing protein 51 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803N1Z3 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology