Basic Information
Locus ID:
evm.TU.LG05.2056
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 42947433 | 42950972 | + | evm.TU.LG05.2056 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.72 | 128,979.21 Da | 49.52 | 60.24 | -0.86 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 564 | 650 | 1.43123E-27 | - |
| Pfam | PF00855 | PWWP domain | 564 | 650 | 3.2E-16 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 560 | 668 | 7.82E-26 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 554 | 657 | 2.0E-24 | - |
| SMART | SM00293 | PWWP_4 | 564 | 625 | 1.9E-7 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 566 | 627 | 15.109559 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1031 | 1047 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 191 | 274 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 40 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 313 | 550 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 431 | 464 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 240 | 259 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 495 | 520 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 521 | 536 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 410 | 429 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 212 | 228 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 158 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 70 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 974 | 1052 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 893 | 936 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 466 | 480 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 208 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02950.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_010672904.1 | uncharacterized protein LOC104889395 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LYZ0 | PWWP domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=PDP5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803MAI6 | PWWP domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology