Basic Information
Locus ID:
evm.TU.LG05.1844
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Tudor PWWP MBT superfamily protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 38258426 | 38260121 | + | evm.TU.LG05.1844 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 58,889.66 Da | 40.34 | 63.25 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 167 | 253 | 8.02343E-30 | - |
| Pfam | PF00855 | PWWP domain | 167 | 250 | 6.3E-16 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 164 | 278 | 6.62E-27 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 156 | 260 | 2.0E-24 | - |
| SMART | SM00293 | PWWP_4 | 167 | 228 | 2.1E-13 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 169 | 230 | 15.318812 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 426 | 470 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 108 | 133 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 505 | 536 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 370 | 411 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 76 | 133 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 511 | 525 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 370 | 399 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 442 | 466 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 37 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 426 | 441 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09670.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_021865134.1 | uncharacterized protein LOC110803906 [Spinacia oleracea] | 0 |
| Q9SF36 | PWWP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PDP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RXW3 | PWWP domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_016280 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology