Basic Information
Locus ID:
evm.TU.LG05.1603
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
SPA1-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG05 | 37360773 | 37367396 | - | evm.TU.LG05.1603 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.56 | 95,532.42 Da | 52.55 | 83.66 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 630 | 668 | 4.9E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 717 | 752 | 6.7E-4 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 545 | 853 | 2.6E-54 | IPR036322 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 58 | 308 | 1.99E-19 | IPR011009 |
| Gene3D | G3DSA:2.130.10.10 | - | 521 | 857 | 4.0E-120 | IPR015943 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 66 | 313 | 2.1E-24 | - |
| SMART | SM00320 | WD40_4 | 628 | 668 | 5.1E-8 | IPR001680 |
| SMART | SM00220 | serkin_6 | 31 | 305 | 5.1E-4 | IPR000719 |
| SMART | SM00320 | WD40_4 | 761 | 800 | 22.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 814 | 855 | 54.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 585 | 625 | 19.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 714 | 752 | 2.5E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 540 | 575 | 1.9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 671 | 710 | 0.25 | IPR001680 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 305 | 12.075397 | IPR000719 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 635 | 677 | 13.215325 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 721 | 754 | 10.337415 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 635 | 672 | 10.258324 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 721 | 754 | 12.413288 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 739 | 753 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 655 | 669 | 6.9E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 612 | 626 | 6.9E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 739 | 753 | 6.9E-6 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 387 | 413 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 134 | 154 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 387 | 414 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G15354.3 | - | 0 |
| RefSeq | XP_031249756.1 | protein SPA1-RELATED 3-like isoform X1 [Pistacia vera] | 0 |
| Q9LJR3 | Protein SPA1-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=SPA3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7ICS4 | Protein kinase domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_008229 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology