halophFGD

Basic Information

Locus ID: evm.TU.LG05.1285

Species & Taxonomic ID: Nitraria sibirica & 357931

Genome Assembly:

Description: SHR-binding domain of vacuolar-sorting associated protein 13

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
LG05	31843842	31846101	+	evm.TU.LG05.1285

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.75	36,215.80 Da	42.68	94.98	-0.03

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID

KEGG Pathway

KO Term:

K19525 (vacuolar protein sorting-associated protein 13A/C)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G48090.5	-
RefSeq	XP_044475427.1	LOW QUALITY PROTEIN: uncharacterized protein LOC123203221 [Mangifera indica]
TrEMBL	A0A5C7IR45	C2 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_000118 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	2	jg12330, jg4926
Aizoaceae	Mesembryanthemum crystallinum	2	gene_2063, gene_23954
Amaranthaceae	Atriplex hortensis	2	Ah004167, Ah027417
Amaranthaceae	Beta vulgaris	2	BVRB_5g105600, BVRB_6g127200
Amaranthaceae	Salicornia bigelovii	5	Sbi_jg13055, Sbi_jg13063, Sbi_jg24399, Sbi_jg52823 ... Sbi_jg8239
Amaranthaceae	Salicornia europaea	3	Seu_jg11784, Seu_jg9052, Seu_jg9057
Amaranthaceae	Suaeda aralocaspica	5	GOSA_00001576, GOSA_00001577, GOSA_00010197, GOSA_00010198 ... GOSA_00010199
Amaranthaceae	Suaeda glauca	6	Sgl33911, Sgl39277, Sgl39278, Sgl39297, Sgl51524, Sgl56809
Amaranthaceae	Chenopodium album	7	gene:ENSEOMG00000000302, gene:ENSEOMG00000004278 ... gene:ENSEOMG00000021558, gene:ENSEOMG00000022325, gene:ENSEOMG00000023727, gene:ENSEOMG00000024108, gene:ENSEOMG00000025117
Amaranthaceae	Chenopodium quinoa	5	CQ.Regalona.r1.5AG0003370, CQ.Regalona.r1.5BG0003540 ... CQ.Regalona.r1.5BG0003560, CQ.Regalona.r1.6AG0025300, CQ.Regalona.r1.6BG0026820
Anacardiaceae	Pistacia vera	13	pistato.v30105180, pistato.v30109730, pistato.v30141550 ... pistato.v30141570, pistato.v30158950, pistato.v30232060, pistato.v30232520, pistato.v30268500, pistato.v30268560, pistato.v30268590, pistato.v30292870, pistato.v30292900, pistato.v30292910
Apiaceae	Apium graveolens	3	Ag5G01766, Ag8G01809, Ag9G02671
Arecaceae	Cocos nucifera	4	COCNU_02G015330, COCNU_02G015340, COCNU_04G006790 ... COCNU_07G004500
Arecaceae	Phoenix dactylifera	2	gene-LOC103710761, gene-LOC103722332
Asparagaceae	Asparagus officinalis	4	AsparagusV1_04.3126.V1.1, AsparagusV1_04.3127.V1.1 ... AsparagusV1_06.1654.V1.1, AsparagusV1_06.1655.V1.1
Asteraceae	Flaveria trinervia	5	Ftri11G02195, Ftri11G04819, Ftri11G17855, Ftri12G01658 ... Ftri13G32263
Brassicaceae	Arabidopsis thaliana	2	AT1G48090.1, AT4G17140.3
Brassicaceae	Eutrema salsugineum	2	Thhalv10011170m.g.v1.0, Thhalv10024176m.g.v1.0
Brassicaceae	Schrenkiella parvula	2	Sp1g35040.v2.2, Sp7g17050.v2.2
Brassicaceae	Brassica nigra	3	BniB04g063010.2N, BniB07g008110.2N, BniB07g022580.2N
Casuarinaceae	Casuarina equisetifolia	2	Ceq01G0781, Ceq09G1400
Casuarinaceae	Casuarina glauca	2	Cgl01G0576, Cgl09G1491
Cymodoceaceae	Cymodocea nodosa	3	gene.Cymno05g03120, gene.Cymno05g03130, gene.Cymno15g04190
Dunaliellaceae	Dunaliella salina	4	Dusal.0367s00014.v1.0, Dusal.0595s00004.v1.0 ... Dusal.0595s00006.v1.0, Dusal.0595s00012.v1.0
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate02g04270, gene.Thate09g09280
Nitrariaceae	Nitraria sibirica	5	evm.TU.LG04.1352, evm.TU.LG05.1284, evm.TU.LG05.1285 ... evm.TU.LG10.1088, evm.TU.LG11.1133
Plantaginaceae	Plantago ovata	2	Pov_00004103, Pov_00026323
Plumbaginaceae	Limonium bicolor	3	Lb4G25461, Lb5G26647, Lb5G26649
Poaceae	Echinochloa crus-galli	5	AH07.1402, AH07.1403, BH01.3196, BH07.1715, CH01.3434
Poaceae	Eleusine coracana subsp. coracana	5	gene-QOZ80_2AG0117140, gene-QOZ80_2AG0130600 ... gene-QOZ80_2AG0130610, gene-QOZ80_2BG0170820, gene-QOZ80_2BG0185880
Poaceae	Hordeum vulgare	2	HORVU.MOREX.r3.1HG0057310.1, HORVU.MOREX.r3.6HG0586400.1
Poaceae	Lolium multiflorum	3	gene-QYE76_012786, gene-QYE76_022497, gene-QYE76_022498
Poaceae	Oryza coarctata	4	Oco03G010000, Oco04G010290, Oco19G010510, Oco20G010330
Poaceae	Oryza sativa	3	LOC_Os02g27110.1, LOC_Os02g27130.1, LOC_Os10g41560.1
Poaceae	Paspalum vaginatum	2	gene-BS78_01G281500, gene-BS78_K256200
Poaceae	Puccinellia tenuiflora	2	Pt_Chr0503243, Pt_Chr0503285
Poaceae	Sporobolus alterniflorus	6	Chr09G005380, Chr09G005390, Chr09G005400, Chr09G011870 ... Chr13G013420, Chr13G019470
Poaceae	Thinopyrum elongatum	2	Tel1E01G366500, Tel6E01G403600
Poaceae	Triticum dicoccoides	4	gene_TRIDC1AG032550, gene_TRIDC1BG037840 ... gene_TRIDC6AG029640, gene_TRIDC6BG036710
Poaceae	Triticum aestivum	6	TraesCS1A02G215400.1, TraesCS1B02G228900.2 ... TraesCS1D02G217900.1, TraesCS6A02G197400.1, TraesCS6B02G224600.1, TraesCS6D02G182900.1
Poaceae	Zea mays	3	Zm00001eb203070_P001, Zm00001eb203090_P001 ... Zm00001eb390790_P001
Poaceae	Zoysia japonica	1	nbis-gene-19044
Poaceae	Zoysia macrostachya	1	Zma_g16310
Portulacaceae	Portulaca oleracea	7	evm.TU.LG04.1034, evm.TU.LG04.3109, evm.TU.LG05.1581 ... evm.TU.LG10.774, evm.TU.LG10.816, evm.TU.LG13.1361, evm.TU.LG17.809
Posidoniaceae	Posidonia oceanica	2	gene.Posoc01g06700, gene.Posoc07g05800
Rhizophoraceae	Bruguiera sexangula	2	evm.TU.Scaffold_16_RagTag.406, evm.TU.Scaffold_3_RagTag.693
Rhizophoraceae	Carallia pectinifolia	3	nbisL1-mrna-1277, nbisL1-mrna-1278, nbisL1-mrna-22664
Rhizophoraceae	Ceriops tagal	3	nbisL1-mrna-14556, nbisL1-mrna-18468, nbisL1-mrna-2792
Rhizophoraceae	Ceriops zippeliana	3	nbisL1-mrna-20139, nbisL1-mrna-20140, nbisL1-mrna-6375
Rhizophoraceae	Kandelia candel	2	evm.TU.utg000019l.797, evm.TU.utg000022l.247
Rhizophoraceae	Kandelia obovata	1	Maker00014320
Rhizophoraceae	Rhizophora apiculata	2	nbisL1-mrna-3388, nbisL1-mrna-5261
Rhizophoraceae	Rhizophora mangle	3	nbisL1-mrna-13126, nbisL1-mrna-13127, nbisL1-mrna-6472
Salicaceae	Populus euphratica	3	populus_peu03097, populus_peu06847, populus_peu20746
Solanaceae	Lycium barbarum	2	gene-LOC132629881, gene-LOC132635217
Solanaceae	Solanum chilense	4	SOLCI005817700, SOLCI005817800, SOLCI006490500 ... SOLCI006490600
Solanaceae	Solanum pennellii	2	gene-LOC107028368, gene-LOC107031055
Tamaricaceae	Reaumuria soongarica	2	gene_14035, gene_8139
Tamaricaceae	Tamarix chinensis	2	TC01G3724, TC10G1108
Zosteraceae	Zostera marina	3	Zosma01g34280.v3.1, Zosma02g14760.v3.1, Zosma03g15620.v3.1