Basic Information
Locus ID:
evm.TU.LG05.1251
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG05 | 30981297 | 30985184 | - | evm.TU.LG05.1251 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.73 | 126,303.97 Da | 37.26 | 105.22 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 864 | 1131 | 6.71795E-85 | - |
| Pfam | PF13855 | Leucine rich repeat | 543 | 600 | 3.7E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 68 | 6.0E-5 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 861 | 1125 | 2.8E-43 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 258 | 311 | 2.1E-9 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 231 | 552 | 2.67E-59 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 465 | 754 | 7.82E-52 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 325 | 8.73E-47 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 845 | 1126 | 1.62E-71 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 225 | 460 | 2.9E-65 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 819 | 930 | 7.4E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 931 | 1140 | 3.1E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 461 | 783 | 2.1E-85 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 154 | 2.9E-18 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 155 | 224 | 3.0E-16 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 202 | 224 | 65.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 515 | 539 | 400.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 858 | 1129 | 2.2E-38 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 467 | 491 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 298 | 322 | 5.2 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 587 | 611 | 6.1 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 346 | 370 | 78.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 635 | 658 | 44.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 442 | 466 | 400.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 274 | 297 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 708 | 732 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 394 | 418 | 65.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 858 | 1131 | 37.445927 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 864 | 887 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 976 | 988 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G17750.1 | PEP1 receptor 2. Encodes PEPR2, a plasma membrane leucine-rich repeat receptor kinase functioning as a receptor for the Pep1 and Pep2 peptides. Pep1 and Pep2 are amino acids that induce the transcription of defense-related genes. | 0 |
| RefSeq | XP_050252904.1 | probable leucine-rich repeat receptor-like protein kinase At5g63930 [Quercus robur] | 0 |
| Q9FZ59 | Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana OX=3702 GN=PEPR2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0DKF2 | Protein kinase domain-containing protein OS=Rhamnella rubrinervis OX=2594499 GN=FNV43_RR23854 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg2137 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30166990 |
| Arecaceae | Cocos nucifera | 1 | COCNU_10G009110 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103711259, gene-LOC120108963 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_04.1110.V1.1 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate08g19500 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG05.1251 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00011074, Pov_00034559 |
| Poaceae | Echinochloa crus-galli | 6 | AH01.2526, AH01.2527, BH01.2855, BH01.2857, CH01.3064 ... |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_2AG0120090, gene-QOZ80_2AG0120110 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0108800.1, HORVU.MOREX.r3.5HG0480440.1 |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_005384, gene-QYE76_045167, gene-QYE76_045217 |
| Poaceae | Oryza coarctata | 2 | Oco20G001010, Oco20G001020 |
| Poaceae | Oryza sativa | 2 | LOC_Os10g06740.1, LOC_Os10g06760.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_01G254700, gene-BS78_01G254800 |
| Poaceae | Puccinellia tenuiflora | 5 | Pt_Chr0301897, Pt_Chr0301916, Pt_Chr0301917, Pt_Chr0701996 ... |
| Poaceae | Sporobolus alterniflorus | 1 | Chr15G016710 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G197400, Tel5E01G350100 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC2AG010300, gene_TRIDC5AG034110 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS2A02G090100.1.cds1, TraesCS2B02G105800.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb026550_P001, Zm00001eb034800_P002 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-42998 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g13073 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc06g08480 |
| Salicaceae | Populus euphratica | 1 | populus_peu29401 |
| Solanaceae | Lycium barbarum | 3 | gene-LOC132631233, gene-LOC132632151, gene-LOC132632152 |
| Solanaceae | Solanum chilense | 2 | SOLCI004878800, SOLCI004878900 |
| Zosteraceae | Zostera marina | 1 | Zosma01g26240.v3.1 |