Basic Information
Locus ID:
evm.TU.LG05.1212
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
WRKY Transcription Factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 18204678 | 18207465 | - | evm.TU.LG05.1212 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.28 | 49,607.09 Da | 66.05 | 52.40 | -0.87 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 346 | 403 | 3.6E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 180 | 235 | 1.0E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 178 | 238 | 2.48E-26 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 337 | 405 | 3.01E-29 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 173 | 239 | 9.3E-29 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 330 | 406 | 9.7E-36 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 345 | 404 | 8.4E-39 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 179 | 237 | 9.1E-38 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 340 | 405 | 38.663979 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 180 | 238 | 24.179501 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 271 | 329 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 28 | 58 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 271 | 290 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_010670218.3 | probable WRKY transcription factor 4 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803LSC9 | WRKY domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology