Basic Information
Locus ID:
evm.TU.LG05.1048
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 12995439 | 12999967 | - | evm.TU.LG05.1048 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.03 | 17,598.95 Da | 49.25 | 85.99 | -0.69 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Coils | Coil | Coil | 66 | 107 | - | - |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021771125.1 | uncharacterized protein LOC110735244 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A7C9EXE2 | RING-type E3 ubiquitin transferase OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg40313 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_24499 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah032544 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_2g040850 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg29892, Sbi_jg43358 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg18533 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00004296 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl66337, Sgl70670 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000022222 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.2AG0003420, CQ.Regalona.r1.2BG0007410 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30173990 |
| Apiaceae | Apium graveolens | 1 | Ag4G00830 |
| Arecaceae | Cocos nucifera | 1 | COCNU_07G011880 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103708303 |
| Asteraceae | Flaveria trinervia | 1 | Ftri18G29441 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT1G51430.1, AT3G28370.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10004882m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp2g17170.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB02g068180.2N, BniB02g068200.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq02G1770 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl02G1828 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno04g05660 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-10296 |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG02.116, evm.TU.LG03.2574 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00023416 |
| Poaceae | Echinochloa crus-galli | 5 | AH06.994, AH06.997, BH05.3739, BH06.1019, CH06.1111 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_6AG0515460 |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.7HG0668380.1, HORVU.MOREX.r3.7HG0668400.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_029079, gene-QYE76_052153 |
| Poaceae | Oryza coarctata | 1 | Oco12G006510 |
| Poaceae | Oryza sativa | 2 | LOC_Os06g12940.1, LOC_Os06g13580.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_10G103500 |
| Poaceae | Puccinellia tenuiflora | 5 | Pt_Chr0203468, Pt_Chr0404605, Pt_Chr0602283, Pt_Chr0603303 ... |
| Poaceae | Sporobolus alterniflorus | 2 | Chr11G018970, Chr21G004090 |
| Poaceae | Thinopyrum elongatum | 4 | Tel7E01G360400, Tel7E01G361400, Tel7E01G361500 ... |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC7AG024680, gene_TRIDC7BG015210 |
| Poaceae | Triticum aestivum | 2 | TraesCS7A02G197100.1, TraesCS7D02G198500.1 |
| Poaceae | Zea mays | 1 | Zm00001eb280040_P001 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-50287, nbis-gene-50288, nbis-gene-51338 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g29431 |
| Portulacaceae | Portulaca oleracea | 6 | evm.TU.LG05.1048, evm.TU.LG05.1049, evm.TU.LG10.969 ... |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g14520 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_3_RagTag.1834 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-2284, nbisL1-mrna-2669 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-16736, nbisL1-mrna-16737 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-3015 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000019l.116 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00001681 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-12092 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-18342 |
| Salicaceae | Populus euphratica | 4 | populus_peu01031, populus_peu23300, populus_peu23301 ... |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132622470 |
| Solanaceae | Solanum chilense | 1 | SOLCI007531400 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107011619 |
| Tamaricaceae | Reaumuria soongarica | 1 | MSTRG.3855_chr02_+ |
| Tamaricaceae | Tamarix chinensis | 1 | TC12G0083 |