Basic Information
Locus ID:
evm.TU.LG04.879
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 17871862 | 17882286 | - | evm.TU.LG04.879 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.94 | 137,915.30 Da | 49.46 | 63.61 | -0.77 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 581 | 667 | 1.52474E-27 | - |
| Pfam | PF00855 | PWWP domain | 581 | 667 | 3.5E-16 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 577 | 696 | 1.02E-25 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 572 | 674 | 1.8E-24 | - |
| SMART | SM00293 | PWWP_4 | 581 | 642 | 1.9E-7 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 583 | 644 | 15.109559 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 910 | 953 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 513 | 537 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 427 | 446 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 504 | 576 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 776 | 802 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 110 | 135 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 339 | 354 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 424 | 491 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 538 | 553 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 267 | 287 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 110 | 124 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 154 | 174 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 339 | 412 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 991 | 1069 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1048 | 1064 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02950.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_010672904.1 | uncharacterized protein LOC104889395 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LYZ0 | PWWP domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=PDP5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803MAI6 | PWWP domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology