Basic Information
Locus ID:
evm.TU.LG04.637
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG04 | 6512368 | 6513885 | - | evm.TU.LG04.637 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 56,167.64 Da | 50.97 | 80.08 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd11449 | bHLH_AtAIB_like | 307 | 371 | 7.83569E-42 | - |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 22 | 210 | 4.5E-54 | IPR025610 |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 313 | 358 | 2.9E-10 | IPR011598 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 309 | 371 | 3.4E-17 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 307 | 374 | 7.0E-16 | IPR036638 |
| SMART | SM00353 | finulus | 315 | 364 | 3.6E-15 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 309 | 358 | 17.015257 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 381 | 417 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 303 | 320 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 382 | 417 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 290 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 269 | 320 | - | - |
| Coils | Coil | Coil | 348 | 375 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G46760.1 | Basic helix-loop-helix (bHLH) DNA-binding family protein. | 0 |
| RefSeq | XP_031251019.1 | transcription factor MYC2 [Pistacia vera] | 0 |
| Q9FIP9 | Transcription factor MYC3 OS=Arabidopsis thaliana OX=3702 GN=MYC3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7I202 | BHLH domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_010079 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology