Basic Information
Locus ID:
evm.TU.LG04.599
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
lysM domain receptor-like kinase 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 10209773 | 10211863 | + | evm.TU.LG04.599 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.25 | 76,271.45 Da | 36.63 | 83.46 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 203 | 241 | 9.38706E-5 | IPR018392 |
| Pfam | PF00069 | Protein kinase domain | 396 | 666 | 5.0E-39 | IPR000719 |
| Pfam | PF01476 | LysM domain | 205 | 248 | 6.9E-5 | IPR018392 |
| SUPERFAMILY | SSF54106 | LysM domain | 203 | 249 | 5.23E-5 | IPR036779 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 369 | 666 | 1.94E-62 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 454 | 685 | 5.2E-52 | - |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 189 | 258 | 3.7E-8 | IPR036779 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 364 | 452 | 5.8E-14 | - |
| SMART | SM00257 | LysM_2 | 138 | 183 | 13.0 | IPR018392 |
| SMART | SM00257 | LysM_2 | 204 | 248 | 0.012 | IPR018392 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 203 | 247 | 10.435634 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 379 | 670 | 32.414223 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G33580.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_010681495.2 | protein LYK5 [Beta vulgaris subsp. vulgaris] | 0 |
| O22808 | Protein LYK5 OS=Arabidopsis thaliana OX=3702 GN=LYK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7C9ALC6 | Protein kinase domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology