Basic Information
Locus ID:
evm.TU.LG04.597
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 10199587 | 10203053 | + | evm.TU.LG04.597 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.13 | 60,479.91 Da | 36.99 | 83.16 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 164 | 200 | 2.75095E-6 | IPR018392 |
| Pfam | PF01476 | LysM domain | 165 | 208 | 3.3E-6 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 257 | 463 | 1.1E-30 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 264 | 535 | 1.85E-51 | IPR011009 |
| SUPERFAMILY | SSF54106 | LysM domain | 163 | 208 | 1.11E-5 | IPR036779 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 233 | 319 | 5.5E-10 | - |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 163 | 214 | 3.0E-7 | IPR036779 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 323 | 549 | 3.0E-44 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 244 | 546 | 28.48497 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 163 | 207 | 9.973105 | IPR018392 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G33580.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_010681495.2 | protein LYK5 [Beta vulgaris subsp. vulgaris] | 0 |
| O22808 | Protein LYK5 OS=Arabidopsis thaliana OX=3702 GN=LYK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9S2X7 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_000660 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology