Basic Information
Locus ID:
evm.TU.LG04.461
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
PAPA-1-like family protein zinc finger (HIT type) family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG04 | 4627306 | 4629856 | - | evm.TU.LG04.461 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.44 | 62,113.47 Da | 60.06 | 51.34 | -1.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04795 | PAPA-1-like conserved region | 414 | 499 | 2.7E-21 | IPR006880 |
| Pfam | PF04438 | HIT zinc finger | 515 | 546 | 7.3E-8 | IPR007529 |
| SMART | SM01406 | PAPA_1_2 | 414 | 499 | 1.6E-31 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 128 | 145 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 17 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 68 | 84 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 126 | 459 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 52 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 405 | 459 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 165 | 201 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 343 | 370 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 271 | 303 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 312 | 329 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 371 | 391 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 91 | - | - |
| Coils | Coil | Coil | 406 | 440 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G47350.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_044494331.1 | uncharacterized protein LOC123217388 [Mangifera indica] | 0 |
| TrEMBL | A0A067H535 | PAPA-1 domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g046352mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology