Basic Information
Locus ID:
evm.TU.LG04.409
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 7625013 | 7627930 | - | evm.TU.LG04.409 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.83 | 41,476.14 Da | 52.13 | 61.26 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16448 | RING-H2 | 254 | 306 | 3.71087E-5 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 248 | 312 | 3.26E-9 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 253 | 309 | 7.3E-6 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 254 | 307 | 10.320587 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 178 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 327 | 349 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 129 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 160 | 178 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG01.342, evm.TU.LG04.409 |