Basic Information
Locus ID:
evm.TU.LG04.3459
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
FIZZY-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 53931945 | 53939962 | - | evm.TU.LG04.3459 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.34 | 83,295.95 Da | 41.84 | 84.60 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 568 | 603 | 2.7E-5 | IPR001680 |
| Pfam | PF06697 | Protein of unknown function (DUF1191) | 35 | 226 | 2.4E-57 | IPR010605 |
| Pfam | PF00400 | WD domain, G-beta repeat | 697 | 733 | 9.7E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 608 | 648 | 0.0054 | IPR001680 |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 487 | 544 | 1.2E-5 | IPR024977 |
| SUPERFAMILY | SSF50998 | Quinoprotein alcohol dehydrogenase-like | 439 | 738 | 1.96E-60 | IPR011047 |
| Gene3D | G3DSA:2.130.10.10 | - | 429 | 737 | 3.4E-123 | IPR015943 |
| SMART | SM00320 | WD40_4 | 480 | 520 | 0.013 | IPR001680 |
| SMART | SM00320 | WD40_4 | 564 | 603 | 4.1E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 523 | 560 | 0.091 | IPR001680 |
| SMART | SM00320 | WD40_4 | 694 | 733 | 2.6E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 436 | 477 | 170.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 606 | 648 | 4.0E-4 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 571 | 612 | 13.449252 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 488 | 529 | 9.906923 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 571 | 603 | 10.917412 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 701 | 734 | 11.919224 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 701 | 734 | 14.41838 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 720 | 734 | - | IPR019775 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22910.1 | FIZZY-related 2. | 0 |
| RefSeq | XP_021735944.1 | protein FIZZY-RELATED 2-like [Chenopodium quinoa] | 0 |
| Q9M7I2 | B-type cell cycle switch protein ccs52A OS=Medicago truncatula OX=3880 GN=CCS52A PE=1 SV=1 | 0 | |
| TrEMBL | A0A8S2B0B0 | Genome assembly, chromosome: 7 OS=Arabidopsis arenosa OX=38785 GN=AARE701A_LOCUS18712 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology