Basic Information
Locus ID:
evm.TU.LG04.3351
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Short Name:
BRH1
Description:
E3 ubiquitin-protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 52797720 | 52804500 | + | evm.TU.LG04.3351 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.06 | 20,157.99 Da | 45.07 | 103.81 | 0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 91 | 134 | 2.8E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 86 | 139 | 6.83E-19 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 70 | 141 | 4.3E-19 | IPR013083 |
| SMART | SM00184 | ring_2 | 91 | 133 | 1.8E-6 | IPR001841 |
| SMART | SM00744 | ringv_2 | 90 | 134 | 0.0088 | IPR011016 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 91 | 134 | 13.212175 | IPR001841 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61460.1 | brassinosteroid-responsive RING-H2. Encodes a novel ring finger protein and forms an N-terminal hydrophobic domain and a C-terminal RING-H2 signature. Expression is down regulated by brassinolide. | 0 |
| RefSeq | XP_017232336.1 | PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Daucus carota subsp. sativus] | 0 |
| Q9XF92 | Brassinosteroid-responsive RING protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRH1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7C9DER1 | RING-type domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology