Basic Information
Locus ID:
evm.TU.LG04.3336
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 52608992 | 52611458 | - | evm.TU.LG04.3336 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 59,870.52 Da | 43.34 | 108.38 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 18 | 55 | 2.4E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 15 | 61 | 5.49E-13 | IPR036047 |
| SUPERFAMILY | SSF52058 | L domain-like | 135 | 342 | 8.5E-8 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 5 | 56 | 3.9E-8 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 107 | 353 | 5.1E-9 | IPR032675 |
| SMART | SM00256 | fbox_2 | 22 | 62 | 5.8E-4 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 16 | 52 | 9.762413 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02920.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_010693452.2 | putative F-box protein At1g49610 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q1PE04 | F-box/LRR-repeat protein 25 OS=Arabidopsis thaliana OX=3702 GN=FBL25 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803M4E3 | F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology