Basic Information
Locus ID:
evm.TU.LG04.3200
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 51045403 | 51052707 | - | evm.TU.LG04.3200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.34 | 100,249.18 Da | 47.22 | 80.95 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 719 | 875 | 1.49398E-59 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 317 | 874 | 5.7E-87 | IPR001394 |
| Pfam | PF06337 | DUSP domain | 44 | 142 | 4.1E-22 | IPR006615 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 314 | 877 | 8.67E-112 | IPR038765 |
| SUPERFAMILY | SSF143791 | DUSP-like | 21 | 142 | 2.88E-25 | IPR035927 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 675 | 881 | 9.0E-58 | - |
| Gene3D | G3DSA:3.30.2230.10 | - | 10 | 155 | 6.3E-35 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 156 | 241 | 9.0E-8 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 302 | 542 | 6.5E-69 | - |
| SMART | SM00695 | dusp | 40 | 145 | 8.3E-28 | IPR006615 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 21 | 142 | 18.980495 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 316 | 877 | 59.401253 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 317 | 332 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 819 | 836 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10570.1 | ubiquitin-specific protease 9. encodes a ubiquitin-specific protease family member, UBP9. | 0 |
| RefSeq | XP_021757775.1 | ubiquitin carboxyl-terminal hydrolase 10-like [Chenopodium quinoa] | 0 |
| Q9ZSB5 | Ubiquitin carboxyl-terminal hydrolase 10 OS=Arabidopsis thaliana OX=3702 GN=UBP10 PE=2 SV=2 | 0 | |
| TrEMBL | A0A7C8YSW4 | Ubiquitin carboxyl-terminal hydrolase OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology