Basic Information
Locus ID:
evm.TU.LG04.3108
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 50021714 | 50023453 | - | evm.TU.LG04.3108 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.91 | 54,139.73 Da | 48.69 | 63.31 | -0.80 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF58113 | Apolipoprotein A-I | 241 | 333 | 1.57E-5 | - |
| Gene3D | G3DSA:1.20.120.20 | Apolipoprotein | 225 | 339 | 1.6E-6 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 437 | 474 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 192 | 211 | - | - |
| Coils | Coil | Coil | 265 | 337 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021907757.1 | F-box protein At3g07870-like [Carica papaya] | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 1 | Ag10G01150 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl02G2813 |
| Portulacaceae | Portulaca oleracea | 14 | evm.TU.LG04.2967, evm.TU.LG04.3108, evm.TU.LG10.771 ... |
| Tamaricaceae | Reaumuria soongarica | 1 | MSTRG.19897_chr11_+ |