Basic Information
Locus ID:
evm.TU.LG04.3036
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
defense response to oomycetes
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 49174955 | 49189131 | + | evm.TU.LG04.3036 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.67 | 97,110.74 Da | 46.72 | 86.99 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 364 | 552 | 3.78773E-52 | IPR001220 |
| CDD | cd00060 | FHA | 9 | 109 | 1.72938E-20 | IPR000253 |
| Pfam | PF00069 | Protein kinase domain | 633 | 745 | 8.0E-18 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 361 | 558 | 6.2E-42 | IPR001220 |
| Pfam | PF00498 | FHA domain | 31 | 100 | 9.7E-16 | IPR000253 |
| Pfam | PF13087 | AAA domain | 314 | 361 | 9.8E-7 | IPR041679 |
| SUPERFAMILY | SSF49879 | SMAD/FHA domain | 5 | 105 | 1.32E-21 | IPR008984 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 256 | 364 | 6.16E-8 | IPR027417 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 363 | 554 | 1.45E-46 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 611 | 746 | 6.97E-34 | IPR011009 |
| Gene3D | G3DSA:2.60.200.20 | - | 1 | 114 | 3.6E-28 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 346 | 573 | 2.8E-54 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 134 | 335 | 4.3E-10 | IPR027417 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 615 | 809 | 8.9E-35 | - |
| SMART | SM00240 | FHA_2 | 30 | 83 | 2.3E-6 | IPR000253 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 632 | 864 | 17.955139 | IPR000719 |
| ProSiteProfiles | PS50006 | Forkhead-associated (FHA) domain profile. | 31 | 83 | 11.9738 | IPR000253 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 638 | 661 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 118 | 199 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 142 | 199 | - | - |
| Coils | Coil | Coil | 212 | 232 | - | - |
| Coils | Coil | Coil | 591 | 611 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G55550.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_021769327.1 | L-type lectin-domain containing receptor kinase IX.1-like [Chenopodium quinoa] | 0 |
| Q9M2S4 | L-type lectin-domain containing receptor kinase S.4 OS=Arabidopsis thaliana OX=3702 GN=LECRKS4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7C9AI49 | Protein kinase domain-containing protein (Fragment) OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg36599, jg36601 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_17867 |
| Amaranthaceae | Atriplex hortensis | 3 | Ah034687, Ah034688, Ah034689 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_2g030170 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg21591, Sbi_jg22231 |
| Amaranthaceae | Salicornia europaea | 3 | Seu_jg16156, Seu_jg16157, Seu_jg16158 |
| Amaranthaceae | Suaeda aralocaspica | 4 | GOSA_00008756, GOSA_00008758, GOSA_00008759, GOSA_00008760 |
| Amaranthaceae | Suaeda glauca | 9 | Sgl62700, Sgl62701, Sgl62702, Sgl62703, Sgl67262, Sgl67321 ... |
| Amaranthaceae | Chenopodium album | 7 | gene:ENSEOMG00000017184, gene:ENSEOMG00000019633 ... |
| Amaranthaceae | Chenopodium quinoa | 4 | CQ.Regalona.r1.1BG0021020, CQ.Regalona.r1.2AG0022820 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30249920 |
| Apiaceae | Apium graveolens | 1 | Ag4G01692 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G2332 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl04G2537 |
| Portulacaceae | Portulaca oleracea | 6 | evm.TU.LG04.3036, evm.TU.LG04.3038, evm.TU.LG16.568 ... |
| Salicaceae | Populus euphratica | 2 | populus_peu04773, populus_peu04774 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107027672, gene-LOC114073871 |
| Tamaricaceae | Reaumuria soongarica | 4 | STRG.32911_chr09_-, STRG.32912_chr09_-, gene_17258 ... |
| Tamaricaceae | Tamarix chinensis | 5 | TC01G1529, TC01G1531, TC02G0491, TC02G0493, TC02G0500 |