Basic Information
Locus ID:
evm.TU.LG04.2967
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
B3 domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 48319859 | 48320224 | + | evm.TU.LG04.2967 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.40 | 13,865.77 Da | 65.91 | 83.80 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 15 | 50 | 1.6E-10 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 9 | 82 | 1.16E-12 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 2 | 51 | 1.7E-8 | - |
| SMART | SM00256 | fbox_2 | 15 | 55 | 5.7E-7 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 9 | 54 | 9.100053 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57580.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_021848420.1 | F-box/kelch-repeat protein At3g06240-like [Spinacia oleracea] | 0 |
| Q6ICX6 | F-box protein At3g57580 OS=Arabidopsis thaliana OX=3702 GN=At3g57580 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7C8YGP6 | F-box domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 1 | Ag10G01150 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl02G2813 |
| Portulacaceae | Portulaca oleracea | 14 | evm.TU.LG04.2967, evm.TU.LG04.3108, evm.TU.LG10.771 ... |
| Tamaricaceae | Reaumuria soongarica | 1 | MSTRG.19897_chr11_+ |