Basic Information
Locus ID:
evm.TU.LG04.2625
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 44237773 | 44243925 | + | evm.TU.LG04.2625 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.17 | 72,300.12 Da | 34.56 | 88.34 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18312 | BTB_POZ_NPY3-like | 58 | 162 | 4.01984E-44 | - |
| Pfam | PF03000 | NPH3 family | 249 | 502 | 4.2E-89 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 59 | 155 | 1.57E-15 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 49 | 159 | 2.8E-11 | IPR011333 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 249 | 526 | 88.828377 | IPR027356 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 532 | 562 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 614 | 651 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 532 | 554 | - | - |
| Coils | Coil | Coil | 565 | 592 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G14820.1 | Phototropic-responsive NPH3 family protein. A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis. | 0 |
| RefSeq | XP_021766219.1 | BTB/POZ domain-containing protein NPY2-like [Chenopodium quinoa] | 0 |
| O80970 | Phototropic-responsive NPH3 family protein NPY2 OS=Arabidopsis thaliana OX=3702 GN=NPY2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803N177 | BTB/POZ domain-containing protein NPY4 OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology